Rhodoferax fermentans str. JCM 7819

Gram-negativeRodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax fermentans
StrainJCM 7819

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax fermentans str. JCM 7819
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax fermentans strain JCM 7819 contig02, whole genome

Gene Summary

Adenine Count

910782 bp

Thymine Count

879289 bp

Guanine Count

1313664 bp

Cytosine Count

1364006 bp

Genome Length

4467741 bp

Protein-coding Genes

3956 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinRF819_03880Not AvailablePositive780495 - 78104019834.7
adenosine deaminaseRF819_03885Not AvailableNegative781098 - 78213838014.4
bmp family abc transporter substrate-binding proteinRF819_03890Not AvailableNegative782267 - 78343341325.1
abc transporter permeaseRF819_03895Not AvailableNegative783515 - 78443532293.2
sugar abc transporter permeaseRF819_03900Not AvailableNegative784435 - 78550238170.9
abc transporterRF819_03905Not AvailableNegative785489 - 78706656578.7
xanthine dehydrogenase small subunitRF819_03910Not AvailablePositive787283 - 78874352504.0
xanthine dehydrogenase molybdopterin binding subunitRF819_03915Not AvailablePositive788740 - 79105882806.7
crp/fnr family transcriptional regulatorRF819_03920Not AvailableNegative791137 - 79176022563.4
8-oxoguanine deaminaseRF819_03925Not AvailablePositive791943 - 79338551510.8

Displaying genes 751 – 760 of 4101 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.