Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax fermentans |
| Strain | JCM 7819 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
910782 bp
Thymine Count
879289 bp
Guanine Count
1313664 bp
Cytosine Count
1364006 bp
Genome Length
4467741 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein urej | RF819_15885 | Not Available | Positive | 3428205 - 3428807 | 20376.3 |
| ni/fe-hydrogenase, b-type cytochrome subunit | RF819_15890 | Not Available | Positive | 3428893 - 3429588 | 26299.5 |
| hydrogenase expression/formation protein | RF819_15895 | Not Available | Positive | 3429594 - 3430229 | 23314.2 |
| hydrogenase | RF819_15900 | Not Available | Positive | 3430229 - 3430540 | 11237.5 |
| hypothetical protein | RF819_15905 | Not Available | Positive | 3430566 - 3431030 | 16700.0 |
| hydrogenase expression/formation protein | RF819_15910 | Not Available | Positive | 3431074 - 3431949 | 31425.5 |
| rubredoxin | RF819_15915 | Not Available | Positive | 3431931 - 3432173 | 8768.25 |
| hypothetical protein | RF819_15920 | Not Available | Positive | 3432170 - 3432676 | 18015.9 |
| hypothetical protein | RF819_15925 | Not Available | Positive | 3432673 - 3433845 | 43066.5 |
| hydrogenase maturation nickel metallochaperone hypa | RF819_15930 | Not Available | Positive | 3433838 - 3434179 | 12232.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.