Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax fermentans |
| Strain | JCM 7819 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
910782 bp
Thymine Count
879289 bp
Guanine Count
1313664 bp
Cytosine Count
1364006 bp
Genome Length
4467741 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RF819_09940 | Not Available | Negative | 2096535 - 2097407 | 31361.1 |
| spermidine/putrescine abc transporter permease | RF819_09945 | Not Available | Negative | 2097499 - 2098389 | 32985.4 |
| spermidine/putrescine abc transporter atp-binding protein | RF819_09950 | Not Available | Negative | 2098376 - 2099548 | 41842.5 |
| spermidine/putrescine abc transporter substrate-binding protein | RF819_09955 | Not Available | Negative | 2099627 - 2100694 | 38776.9 |
| tigr00266 family protein | RF819_09960 | Not Available | Positive | 2100905 - 2101735 | 28478.6 |
| cobyrinic acid a,c-diamide synthase | RF819_09965 | Not Available | Positive | 2101813 - 2102430 | 22491.1 |
| hypothetical protein | RF819_09970 | Not Available | Positive | 2102727 - 2104310 | 59098.5 |
| hypothetical protein | RF819_09975 | Not Available | Negative | 2104676 - 2105464 | 28872.0 |
| helicase | RF819_09980 | Not Available | Negative | 2105514 - 2108198 | 99147.9 |
| dna topoisomerase iii | RF819_09985 | Not Available | Negative | 2108505 - 2111480 | 108425.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.