Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax fermentans |
| Strain | JCM 7819 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
910782 bp
Thymine Count
879289 bp
Guanine Count
1313664 bp
Cytosine Count
1364006 bp
Genome Length
4467741 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoplasmic protein | RF819_09635 | Not Available | Negative | 2039450 - 2040574 | 41795.9 |
| dna alkylation repair protein | RF819_09640 | Not Available | Positive | 2040675 - 2041793 | 40840.2 |
| alpha-ketoglutarate-dependent dioxygenase alkb | RF819_09645 | Not Available | Positive | 2041879 - 2042538 | 23644.4 |
| lysr family transcriptional regulator | RF819_09650 | Not Available | Negative | 2042601 - 2043491 | 31905.8 |
| 3-beta hydroxysteroid dehydrogenase | RF819_09655 | Not Available | Positive | 2043625 - 2044269 | 22423.0 |
| hypothetical protein | RF819_09660 | Not Available | Negative | 2044285 - 2044542 | 9530.09 |
| dtw domain-containing protein | RF819_09665 | Not Available | Negative | 2044539 - 2045330 | 29431.5 |
| hypothetical protein | RF819_09670 | Not Available | Positive | 2045594 - 2045929 | 11686.6 |
| hypothetical protein | RF819_09675 | Not Available | Positive | 2046165 - 2046842 | 24990.9 |
| esterase | RF819_09680 | Not Available | Positive | 2046891 - 2047586 | 24592.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.