Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax fermentans |
| Strain | JCM 7819 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
910782 bp
Thymine Count
879289 bp
Guanine Count
1313664 bp
Cytosine Count
1364006 bp
Genome Length
4467741 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine--trna ligase | RF819_00200 | Not Available | Negative | 36793 - 39414 | 94419.6 |
| gntr family transcriptional regulator | RF819_00205 | Not Available | Negative | 39525 - 40919 | 51498.9 |
| 4-aminobutyrate--2-oxoglutarate transaminase | RF819_00210 | Not Available | Positive | 41175 - 42467 | 45569.0 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | RF819_00215 | Not Available | Positive | 42549 - 43640 | 39523.8 |
| spermidine/putrescine abc transporter substrate-binding protein | RF819_00220 | Not Available | Positive | 43703 - 44734 | 37589.7 |
| polyamine abc transporter substrate-binding protein | RF819_00225 | Not Available | Positive | 44762 - 46003 | 45142.0 |
| polyamine abc transporter permease | RF819_00230 | Not Available | Positive | 46028 - 46846 | 29538.9 |
| succinate-semialdehyde dehydrogenase (nadp(+)) | RF819_00240 | Not Available | Positive | 47304 - 48782 | 52417.9 |
| hypothetical protein | RF819_00245 | Not Available | Negative | 48827 - 49555 | 27256.8 |
| Trna-gly | Not Available | Not Available | Positive | 49681 - 49754 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.