Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax fermentans |
| Strain | JCM 7819 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
910782 bp
Thymine Count
879289 bp
Guanine Count
1313664 bp
Cytosine Count
1364006 bp
Genome Length
4467741 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching enzyme | RF819_06795 | Not Available | Positive | 1410595 - 1412775 | 81780.8 |
| glycogen debranching enzyme glgx | RF819_06800 | Not Available | Positive | 1412763 - 1414874 | 78230.2 |
| 4-alpha-glucanotransferase | RF819_06805 | Not Available | Negative | 1414912 - 1416420 | 56515.9 |
| starch synthase | RF819_06810 | Not Available | Negative | 1416509 - 1417957 | 52926.2 |
| glucose-1-phosphate adenylyltransferase | RF819_06815 | Not Available | Negative | 1417974 - 1419245 | 46730.0 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | RF819_06820 | Not Available | Negative | 1419293 - 1420954 | 58650.0 |
| peptide chain release factor 3 | RF819_06825 | Not Available | Positive | 1421212 - 1422843 | 60205.2 |
| had family hydrolase | RF819_06830 | Not Available | Positive | 1422857 - 1423711 | 31161.0 |
| hypothetical protein | RF819_06835 | Not Available | Positive | 1423719 - 1424912 | 41613.3 |
| hypothetical protein | RF819_06840 | Not Available | Positive | 1424955 - 1425431 | 16923.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.