Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax fermentans |
| Strain | JCM 7819 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
910782 bp
Thymine Count
879289 bp
Guanine Count
1313664 bp
Cytosine Count
1364006 bp
Genome Length
4467741 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RF819_06345 | Not Available | Negative | 1300198 - 1301016 | 29411.5 |
| glutamate synthase | RF819_06350 | Not Available | Negative | 1301105 - 1302571 | 53233.6 |
| glutamate synthase subunit alpha | RF819_06355 | Not Available | Negative | 1302599 - 1307329 | 172202.0 |
| transposase | RF819_06360 | Not Available | Negative | 1307506 - 1308210 | 26554.1 |
| hypothetical protein | RF819_06365 | Not Available | Negative | 1308236 - 1308715 | 15929.5 |
| sam-dependent methyltransferase | RF819_06370 | Not Available | Negative | 1308732 - 1309739 | 37340.1 |
| peptidase | RF819_06375 | Not Available | Negative | 1309720 - 1310325 | 22183.1 |
| deoxyguanosinetriphosphate triphosphohydrolase | RF819_06380 | Not Available | Negative | 1310419 - 1311627 | 45254.9 |
| 3-dehydroquinate synthase | RF819_06385 | Not Available | Negative | 1311677 - 1312783 | 39342.9 |
| shikimate kinase | RF819_06390 | Not Available | Negative | 1312804 - 1313328 | 19450.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.