Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax fermentans |
| Strain | JCM 7819 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
910782 bp
Thymine Count
879289 bp
Guanine Count
1313664 bp
Cytosine Count
1364006 bp
Genome Length
4467741 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, hydrophobic membrane anchor protein | RF819_05490 | Not Available | Positive | 1139767 - 1140132 | 13944.4 |
| succinate dehydrogenase flavoprotein subunit | RF819_05495 | Not Available | Positive | 1140222 - 1142027 | 65298.6 |
| succinate dehydrogenase iron-sulfur subunit | RF819_05500 | Not Available | Positive | 1142059 - 1142763 | 26719.5 |
| succinate dehydrogenase assembly factor 2 | RF819_05505 | Not Available | Positive | 1142777 - 1143097 | 12242.7 |
| citrate (si)-synthase | RF819_05510 | Not Available | Positive | 1143084 - 1144394 | 48706.6 |
| lysr family transcriptional regulator | RF819_05515 | Not Available | Positive | 1144772 - 1145686 | 32952.9 |
| 3-isopropylmalate dehydratase large subunit | RF819_05520 | Not Available | Positive | 1145700 - 1147157 | 51987.2 |
| entericidin | RF819_05525 | Not Available | Positive | 1147180 - 1147308 | 4290.36 |
| 3-isopropylmalate dehydratase small subunit | RF819_05530 | Not Available | Positive | 1147305 - 1147955 | 24361.2 |
| 3-isopropylmalate dehydrogenase | RF819_05535 | Not Available | Positive | 1148066 - 1149133 | 38333.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.