Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | DAH51_03880 | Not Available | Positive | 829457 - 830815 | 49088.8 |
| had family hydrolase | DAH51_03885 | Not Available | Positive | 830826 - 831485 | 23444.0 |
| hypothetical protein | DAH51_03890 | Not Available | Positive | 831482 - 831736 | 9565.25 |
| atpase | DAH51_03895 | Not Available | Positive | 831733 - 832428 | 24858.2 |
| hypothetical protein | DAH51_03900 | Not Available | Positive | 832527 - 833252 | 24322.9 |
| twin-arginine translocation pathway signal protein | DAH51_03905 | Not Available | Negative | 833298 - 833981 | 24462.1 |
| hypothetical protein | DAH51_03910 | Not Available | Negative | 834034 - 834354 | 11071.8 |
| murein l,d-transpeptidase | DAH51_03915 | Not Available | Negative | 834360 - 835820 | 52602.2 |
| histone deacetylase | DAH51_03920 | Not Available | Positive | 835878 - 836780 | 31701.1 |
| hypothetical protein | DAH51_03925 | Not Available | Negative | 836760 - 837338 | 19909.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
