Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase assembly protein | DAH51_03780 | Not Available | Positive | 814054 - 814629 | 21181.4 |
| cytochrome c oxidase subunit 3 | DAH51_03785 | Not Available | Positive | 814674 - 815504 | 30768.7 |
| duf983 domain-containing protein | DAH51_03790 | Not Available | Positive | 815515 - 815898 | 13438.7 |
| surf1 family protein | DAH51_03795 | Not Available | Positive | 815895 - 816536 | 22812.0 |
| threonine synthase | DAH51_03800 | Not Available | Positive | 816581 - 817981 | 50191.6 |
| class i sam-dependent rrna methyltransferase | DAH51_03805 | Not Available | Positive | 818035 - 818904 | 32513.7 |
| endonuclease domain-containing protein | DAH51_03810 | Not Available | Positive | 818987 - 819337 | 13479.9 |
| glutaminyl-peptide cyclotransferase | DAH51_03815 | Not Available | Negative | 819399 - 820145 | 27995.3 |
| folate-binding protein | DAH51_03820 | Not Available | Negative | 820142 - 820879 | 27061.1 |
| dihydroorotase | DAH51_03825 | Not Available | Positive | 821085 - 822416 | 48501.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
