Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DAH51_02975 | Not Available | Negative | 643656 - 645524 | 67775.0 |
| ompa family protein | DAH51_02980 | Not Available | Negative | 645724 - 646599 | 30396.2 |
| tonb-dependent siderophore receptor | DAH51_02985 | Not Available | Positive | 647257 - 649407 | 78606.9 |
| catalase/peroxidase hpi | DAH51_02990 | Not Available | Negative | 650114 - 652378 | 81396.9 |
| beta-glucosidase | DAH51_02995 | Not Available | Negative | 652510 - 654795 | 81419.7 |
| qace family quaternary ammonium compound efflux smr transporter | DAH51_03000 | Not Available | Negative | 654957 - 655277 | 11040.0 |
| Trna-tyr | Not Available | Not Available | Positive | 655363 - 655448 | Not Available |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DAH51_03010 | Not Available | Positive | 655552 - 656292 | 26352.7 |
| hypothetical protein | DAH51_03015 | Not Available | Positive | 656373 - 657140 | 26748.7 |
| ferredoxin | DAH51_03020 | Not Available | Negative | 657150 - 657467 | 11282.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
