Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DAH51_02405 | Not Available | Negative | 527137 - 527994 | 30071.1 |
| penicillin-binding protein activator | DAH51_02410 | Not Available | Positive | 528039 - 529211 | 40631.7 |
| abc transporter atp-binding protein | DAH51_02415 | Not Available | Negative | 529249 - 530022 | 26709.0 |
| iron abc transporter permease | DAH51_02420 | Not Available | Negative | 530016 - 531011 | 33587.8 |
| tonb-dependent receptor | DAH51_02425 | Not Available | Negative | 531024 - 532880 | 66005.3 |
| threonine/serine dehydratase | DAH51_02430 | Not Available | Positive | 533434 - 534438 | 33837.4 |
| energy transducer tonb | DAH51_02435 | Not Available | Positive | 534481 - 535131 | 22753.9 |
| diaminopimelate epimerase | DAH51_02440 | Not Available | Positive | 535189 - 536001 | 28711.3 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DAH51_02445 | Not Available | Positive | 536004 - 537245 | 44660.8 |
| signal recognition particle-docking protein ftsy | DAH51_02450 | Not Available | Positive | 537245 - 538183 | 33465.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
