Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbj | DAH51_02005 | Not Available | Negative | 449322 - 450041 | 25755.7 |
| conjugal transfer protein trbe | DAH51_02010 | Not Available | Negative | 450038 - 452479 | 88931.0 |
| conjugal transfer protein | DAH51_02015 | Not Available | Negative | 452476 - 452757 | 10018.3 |
| conjugal transfer protein trbc | DAH51_02020 | Not Available | Negative | 452754 - 453089 | 11478.2 |
| p-type conjugative transfer atpase trbb | DAH51_02025 | Not Available | Negative | 453086 - 454072 | 34685.2 |
| hypothetical protein | DAH51_02030 | Not Available | Negative | 454232 - 454897 | 24561.2 |
| ribbon-helix-helix protein, copg family | DAH51_02035 | Not Available | Negative | 455077 - 455505 | 16187.3 |
| conjugal transfer protein trag | DAH51_02040 | Not Available | Negative | 455515 - 457491 | 72097.2 |
| duf3363 domain-containing protein | DAH51_02045 | Not Available | Negative | 457508 - 459418 | 70233.2 |
| hypothetical protein | DAH51_02050 | Not Available | Negative | 459507 - 460088 | 21301.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
