Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase catalytic subunit | DAH51_27330 | Not Available | Negative | 5672580 - 5672672 | 3060.66 |
| is5/is1182 family transposase | DAH51_27335 | Not Available | Positive | 5672673 - 5672782 | 4192.21 |
| excinuclease abc subunit uvra | DAH51_27340 | Not Available | Negative | 5673913 - 5676828 | 105711.0 |
| autotransporter domain-containing protein | DAH51_27345 | Not Available | Positive | 5677049 - 5680030 | 107107.0 |
| calcium-binding protein | DAH51_27350 | Not Available | Positive | 5680169 - 5682890 | 91141.6 |
| atp-binding protein | DAH51_27355 | Not Available | Positive | 5682891 - 5683015 | 4471.19 |
| rna 2',3'-cyclic phosphodiesterase | DAH51_27360 | Not Available | Positive | 5683440 - 5683997 | 20102.9 |
| superoxide dismutase family protein | DAH51_27365 | Not Available | Negative | 5684022 - 5684558 | 17549.7 |
| hypothetical protein | DAH51_27370 | Not Available | Negative | 5684572 - 5684844 | 9796.89 |
| flagellar motor protein motb | DAH51_27375 | Not Available | Negative | 5685048 - 5686076 | 35757.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
