Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DAH51_01390 | Not Available | Positive | 317623 - 320457 | 100005.0 |
| anti-sigma factor | DAH51_01395 | Not Available | Negative | 320614 - 321300 | 23853.5 |
| rna polymerase sigma factor | DAH51_01400 | Not Available | Negative | 321297 - 321785 | 17878.5 |
| serine protease | DAH51_01405 | Not Available | Positive | 321876 - 323183 | 44386.1 |
| hypothetical protein | DAH51_01410 | Not Available | Positive | 323283 - 323978 | 21433.2 |
| pas domain-containing protein | DAH51_01415 | Not Available | Negative | 324070 - 324687 | 22228.4 |
| dna-binding response regulator | DAH51_01420 | Not Available | Negative | 324844 - 325551 | 26359.1 |
| lysr family transcriptional regulator | DAH51_01425 | Not Available | Negative | 325840 - 326733 | 32621.2 |
| pirin family protein | DAH51_01430 | Not Available | Positive | 326843 - 327562 | 26018.4 |
| nad(p)h:quinone oxidoreductase | DAH51_01435 | Not Available | Positive | 327692 - 328291 | 20784.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
