Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2840 domain-containing protein | DAH51_23860 | Not Available | Positive | 4993390 - 4993911 | 19766.9 |
| s26 family signal peptidase | DAH51_23865 | Not Available | Positive | 4993908 - 4994453 | 19346.3 |
| duf736 domain-containing protein | DAH51_23870 | Not Available | Positive | 4994500 - 4994847 | 12840.9 |
| lytic transglycosylase domain-containing protein | DAH51_23875 | Not Available | Positive | 4994851 - 4995612 | 26497.6 |
| duf3363 domain-containing protein | DAH51_23880 | Not Available | Positive | 4995857 - 4997596 | 64080.5 |
| conjugal transfer protein trag | DAH51_23885 | Not Available | Positive | 4997623 - 4999608 | 73644.2 |
| copg family transcriptional regulator | DAH51_23890 | Not Available | Positive | 4999618 - 5000049 | 15849.1 |
| p-type conjugative transfer atpase trbb | DAH51_23895 | Not Available | Positive | 5000219 - 5001202 | 34461.5 |
| conjugal transfer protein trbc | DAH51_23900 | Not Available | Positive | 5001199 - 5001531 | 11458.3 |
| conjugal transfer protein | DAH51_23905 | Not Available | Positive | 5001531 - 5001812 | 9784.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
