Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trad | DAH51_23525 | Not Available | Negative | 4934447 - 4934671 | 8153.63 |
| conjugal transfer protein trad | DAH51_23530 | Not Available | Negative | 4934685 - 4935014 | 11098.0 |
| hypothetical protein | DAH51_23535 | Not Available | Negative | 4935014 - 4935271 | 9339.35 |
| ti-type conjugative transfer relaxase traa | DAH51_23540 | Not Available | Positive | 4935424 - 4938510 | 112950.0 |
| hypothetical protein | DAH51_23545 | Not Available | Positive | 4938525 - 4939235 | 26040.0 |
| flagellar hook-basal body complex protein flie | DAH51_23550 | Not Available | Positive | 4939663 - 4940151 | 17147.5 |
| hypothetical protein | DAH51_23555 | Not Available | Positive | 4940241 - 4940441 | 7044.22 |
| duf4440 domain-containing protein | DAH51_23560 | Not Available | Negative | 4940456 - 4940923 | 16758.9 |
| iron permease | DAH51_23565 | Not Available | Negative | 4941356 - 4943239 | 67085.9 |
| nad-dependent epimerase/dehydratase family protein | DAH51_23570 | Not Available | Negative | 4943548 - 4946235 | 96388.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
