Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer atpase trbb | DAH51_23420 | Not Available | Negative | 4916405 - 4917391 | 34694.1 |
| copg family transcriptional regulator | DAH51_23425 | Not Available | Negative | 4917565 - 4917993 | 16105.2 |
| conjugal transfer protein trag | DAH51_23430 | Not Available | Negative | 4918003 - 4919976 | 72100.4 |
| duf3363 domain-containing protein | DAH51_23435 | Not Available | Negative | 4919991 - 4921748 | 64006.4 |
| lytic transglycosylase domain-containing protein | DAH51_23440 | Not Available | Negative | 4921987 - 4922898 | 31613.8 |
| duf736 domain-containing protein | DAH51_23445 | Not Available | Negative | 4922903 - 4923238 | 12290.1 |
| s26 family signal peptidase | DAH51_23450 | Not Available | Negative | 4923275 - 4923820 | 19388.6 |
| duf2840 domain-containing protein | DAH51_23455 | Not Available | Negative | 4923817 - 4924323 | 19320.1 |
| dna-binding protein | DAH51_23460 | Not Available | Negative | 4924320 - 4924586 | 9829.63 |
| duf2285 domain-containing protein | DAH51_23465 | Not Available | Negative | 4924716 - 4925141 | 15945.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
