Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator gcva | DAH51_01240 | Not Available | Negative | 287870 - 288787 | 33216.8 |
| duf1338 domain-containing protein | DAH51_01245 | Not Available | Positive | 288876 - 289892 | 36451.1 |
| formyltetrahydrofolate deformylase | DAH51_01250 | Not Available | Positive | 289945 - 290814 | 32436.9 |
| s-formylglutathione hydrolase | DAH51_01255 | Not Available | Negative | 291276 - 292112 | 30237.6 |
| voc family protein | DAH51_01260 | Not Available | Negative | 292127 - 292507 | 13230.8 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | DAH51_01265 | Not Available | Negative | 292534 - 293646 | 39465.7 |
| duf2093 domain-containing protein | DAH51_01270 | Not Available | Negative | 294165 - 294380 | 7955.34 |
| nitronate monooxygenase | DAH51_01275 | Not Available | Negative | 294380 - 295783 | 51308.8 |
| glycosyltransferase | DAH51_01280 | Not Available | Negative | 295877 - 297031 | 41009.6 |
| alpha/beta hydrolase | DAH51_01285 | Not Available | Negative | 297024 - 297893 | 31594.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
