Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | DAH51_20880 | Not Available | Positive | 4381936 - 4384008 | 74959.4 |
| transcription elongation factor greb | DAH51_20885 | Not Available | Positive | 4384054 - 4384539 | 17974.2 |
| lysr family transcriptional regulator | DAH51_20890 | Not Available | Negative | 4384640 - 4385512 | 30998.7 |
| subclass b3 metallo-beta-lactamase | DAH51_20895 | Not Available | Positive | 4385620 - 4386546 | 32728.5 |
| sdr family nad(p)-dependent oxidoreductase | DAH51_20900 | Not Available | Positive | 4386607 - 4387428 | 28617.2 |
| choline dehydrogenase | DAH51_20905 | Not Available | Negative | 4387430 - 4389040 | 57208.1 |
| duf932 domain-containing protein | DAH51_20915 | Not Available | Negative | 4389762 - 4390958 | 44366.4 |
| sos response-associated peptidase | DAH51_20920 | Not Available | Positive | 4391193 - 4391783 | 22221.6 |
| dna polymerase iii subunit alpha | DAH51_20930 | Not Available | Negative | 4392023 - 4395295 | 121662.0 |
| dna polymerase y family protein | DAH51_20935 | Not Available | Negative | 4395292 - 4396803 | 54375.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
