Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DAH51_19200 | Not Available | Positive | 4065422 - 4067986 | 91419.6 |
| atxe2 family lasso peptide isopeptidase | DAH51_19205 | Not Available | Positive | 4068028 - 4070061 | 73866.3 |
| asparagine synthetase b family protein | DAH51_19210 | Not Available | Negative | 4070079 - 4071464 | 51429.0 |
| lasso peptide biosynthesis b2 protein | DAH51_19215 | Not Available | Negative | 4071776 - 4072465 | 25486.2 |
| benenodin family lasso peptide | DAH51_19220 | Not Available | Negative | 4072513 - 4072671 | 5590.5 |
| gntr family transcriptional regulator | DAH51_19225 | Not Available | Negative | 4072819 - 4073433 | 22667.2 |
| transcriptional regulator | DAH51_19230 | Not Available | Negative | 4073440 - 4073862 | 15555.7 |
| hypothetical protein | DAH51_19235 | Not Available | Negative | 4074020 - 4074427 | 14841.9 |
| dsbc family protein | DAH51_19240 | Not Available | Positive | 4074860 - 4075651 | 27738.8 |
| hypothetical protein | DAH51_19245 | Not Available | Positive | 4075846 - 4076160 | 10611.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
