Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase family protein | DAH51_18930 | Not Available | Negative | 4014836 - 4015786 | 35435.4 |
| n-formylglutamate amidohydrolase | DAH51_18935 | Not Available | Positive | 4015802 - 4016611 | 29105.5 |
| na+/h+ antiporter nhaa | DAH51_18940 | Not Available | Negative | 4016608 - 4018005 | 49917.5 |
| sigma-70 family rna polymerase sigma factor | DAH51_18945 | Not Available | Negative | 4018107 - 4018442 | 12550.4 |
| rna polymerase sigma factor | DAH51_18950 | Not Available | Positive | 4019011 - 4019577 | 21752.9 |
| hypothetical protein | DAH51_18955 | Not Available | Positive | 4019567 - 4020610 | 37876.1 |
| tonb-dependent receptor | DAH51_18960 | Not Available | Positive | 4020694 - 4023264 | 90495.7 |
| atxe2 family lasso peptide isopeptidase | DAH51_18965 | Not Available | Positive | 4023261 - 4025321 | 75826.2 |
| asparagine synthetase b family protein | DAH51_18970 | Not Available | Negative | 4025338 - 4027095 | 64768.1 |
| lasso peptide biosynthesis b2 protein | DAH51_18975 | Not Available | Negative | 4027089 - 4027823 | 27540.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
