Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspi | DAH51_18720 | Not Available | Negative | 3968420 - 3968824 | 14609.6 |
| type ii secretion system protein gsph | DAH51_18725 | Not Available | Negative | 3968847 - 3969302 | 16124.5 |
| type ii secretion system protein gspg | DAH51_18730 | Not Available | Negative | 3969385 - 3969810 | 15249.2 |
| type ii secretion system protein gspf | DAH51_18735 | Not Available | Negative | 3969903 - 3971120 | 44026.7 |
| type ii secretion system protein gspe | DAH51_18740 | Not Available | Negative | 3971113 - 3972654 | 55511.8 |
| type ii secretion system protein gspd | DAH51_18745 | Not Available | Negative | 3972651 - 3974897 | 77984.7 |
| pdz domain-containing protein | DAH51_18750 | Not Available | Negative | 3974894 - 3975742 | 29298.1 |
| oxygenase | DAH51_18755 | Not Available | Positive | 3975927 - 3976586 | 24376.7 |
| tonb-dependent receptor | DAH51_18760 | Not Available | Negative | 3976728 - 3978854 | 75994.2 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | DAH51_18765 | Not Available | Positive | 3979295 - 3982060 | 98994.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
