Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-24 | DAH51_18565 | Not Available | Positive | 3934234 - 3934845 | 22819.4 |
| duf4880 domain-containing protein | DAH51_18570 | Not Available | Positive | 3934909 - 3935952 | 37737.8 |
| tonb-dependent siderophore receptor | DAH51_18575 | Not Available | Positive | 3936088 - 3938604 | 90077.0 |
| nuclear transport factor 2 family protein | DAH51_18580 | Not Available | Negative | 3939009 - 3939479 | 18395.5 |
| pyridoxamine 5-phosphate oxidase | DAH51_18585 | Not Available | Negative | 3939479 - 3940108 | 23796.1 |
| alpha/beta hydrolase | DAH51_18590 | Not Available | Negative | 3940169 - 3941143 | 36217.2 |
| lysr family transcriptional regulator | DAH51_18595 | Not Available | Negative | 3941268 - 3942170 | 32640.4 |
| l,d-transpeptidase | DAH51_18600 | Not Available | Positive | 3942389 - 3943399 | 36841.0 |
| hypothetical protein | DAH51_18605 | Not Available | Positive | 3943521 - 3944009 | 18000.5 |
| glycosyl transferase | DAH51_18610 | Not Available | Positive | 3944150 - 3945385 | 45811.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
