Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketohydroxyglutarate aldolase | DAH51_18210 | Not Available | Negative | 3853417 - 3853725 | 10613.3 |
| tonb-dependent siderophore receptor | DAH51_18215 | Not Available | Negative | 3853722 - 3855845 | 78031.9 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | DAH51_18220 | Not Available | Positive | 3856043 - 3858436 | 86142.0 |
| tonb-dependent receptor | DAH51_18225 | Not Available | Negative | 3858474 - 3859643 | 41865.5 |
| endonuclease | DAH51_18230 | Not Available | Negative | 3859640 - 3860725 | 38476.3 |
| thioesterase family protein | DAH51_18235 | Not Available | Positive | 3860924 - 3861694 | 27456.8 |
| acetyl-coa hydrolase/transferase family protein | DAH51_18240 | Not Available | Negative | 3861695 - 3863029 | 47347.1 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | DAH51_18245 | Not Available | Negative | 3863159 - 3864658 | 53492.3 |
| cyclohexanecarboxylate-coa ligase | DAH51_18250 | Not Available | Positive | 3864813 - 3866441 | 58057.5 |
| cytochrome c family protein | DAH51_18255 | Not Available | Positive | 3866491 - 3866928 | 15235.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
