Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | DAH51_00790 | Not Available | Positive | 184905 - 186824 | 68148.6 |
| duf4403 family protein | DAH51_00795 | Not Available | Positive | 186909 - 188384 | 53685.1 |
| vanillate o-demethylase oxidoreductase vanb | DAH51_00800 | Not Available | Positive | 188449 - 188904 | 16939.9 |
| transcriptional regulator | DAH51_00805 | Not Available | Positive | 188891 - 189223 | 11770.1 |
| duf3035 domain-containing protein | DAH51_00810 | Not Available | Negative | 189225 - 189659 | 14110.5 |
| signal peptidase ii | DAH51_00815 | Not Available | Negative | 189659 - 190171 | 19011.7 |
| isoleucine--trna ligase | DAH51_00820 | Not Available | Negative | 190168 - 193050 | 107603.0 |
| bifunctional riboflavin kinase/fad synthetase | DAH51_00825 | Not Available | Negative | 193202 - 194128 | 33019.8 |
| dihydrofolate reductase | DAH51_00830 | Not Available | Negative | 194320 - 194814 | 18049.5 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | DAH51_00835 | Not Available | Negative | 194942 - 196012 | 37570.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
