Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy domain-containing protein | DAH51_16735 | Not Available | Negative | 3527795 - 3529288 | 53496.9 |
| hypothetical protein | DAH51_16740 | Not Available | Negative | 3529285 - 3529851 | 19605.1 |
| tonb-dependent receptor | DAH51_16745 | Not Available | Negative | 3529845 - 3532127 | 82957.9 |
| tonb-dependent receptor | DAH51_16750 | Not Available | Negative | 3532317 - 3535190 | 103379.0 |
| pectate lyase | DAH51_16755 | Not Available | Positive | 3535558 - 3536961 | 50690.4 |
| cupin domain-containing protein | DAH51_16760 | Not Available | Positive | 3536958 - 3537344 | 13861.0 |
| carboxylesterase/lipase family protein | DAH51_16765 | Not Available | Negative | 3537605 - 3539173 | 56012.5 |
| 2-deoxy-d-gluconate 3-dehydrogenase | DAH51_16770 | Not Available | Negative | 3539261 - 3540016 | 26041.0 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DAH51_16775 | Not Available | Negative | 3540104 - 3540943 | 30779.6 |
| laci family dna-binding transcriptional regulator | DAH51_16780 | Not Available | Negative | 3541019 - 3542068 | 37841.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
