Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s8/s53 subtilisin kexin sedolisin | DAH51_16580 | Not Available | Negative | 3499293 - 3500876 | 56451.1 |
| hypothetical protein | DAH51_16585 | Not Available | Negative | 3500922 - 3503039 | 75597.1 |
| tir domain-containing protein | DAH51_16590 | Not Available | Negative | 3503036 - 3503668 | 24099.5 |
| hypothetical protein | DAH51_16595 | Not Available | Negative | 3503668 - 3504453 | 28236.0 |
| toll/interleukin-1 receptor domain-containing protein | DAH51_16600 | Not Available | Negative | 3504453 - 3505940 | 54020.6 |
| hypothetical protein | DAH51_16605 | Not Available | Negative | 3506690 - 3506946 | 9286.04 |
| is5/is1182 family transposase | DAH51_16610 | Not Available | Negative | 3506947 - 3507068 | 4874.9 |
| stability determinant | DAH51_16615 | Not Available | Positive | 3507587 - 3507769 | 6603.74 |
| type ii toxin-antitoxin system rele/pare family toxin | DAH51_16620 | Not Available | Positive | 3507769 - 3508044 | 10664.8 |
| zinc ribbon domain-containing protein | DAH51_16625 | Not Available | Positive | 3508107 - 3508385 | 10068.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
