Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DAH51_16530 | Not Available | Positive | 3490368 - 3491393 | 35213.7 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | DAH51_16535 | Not Available | Positive | 3491383 - 3492237 | 30464.2 |
| hypothetical protein | DAH51_16540 | Not Available | Negative | 3492834 - 3493316 | 16773.7 |
| transcriptional regulator beti | DAH51_16545 | Not Available | Positive | 3493487 - 3494089 | 21206.3 |
| peroxiredoxin | DAH51_16550 | Not Available | Positive | 3494224 - 3494787 | 20669.6 |
| alkyl hydroperoxide reductase subunit f | DAH51_16555 | Not Available | Positive | 3494974 - 3496554 | 56079.3 |
| hypothetical protein | DAH51_16560 | Not Available | Negative | 3496668 - 3496862 | 7062.26 |
| right-handed parallel beta-helix repeat-containing protein | DAH51_16565 | Not Available | Negative | 3496894 - 3497832 | 32967.0 |
| hypothetical protein | DAH51_16570 | Not Available | Negative | 3498003 - 3498587 | 20125.3 |
| hypothetical protein | DAH51_16575 | Not Available | Negative | 3498550 - 3499278 | 25806.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
