Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response dexh box helicase | DAH51_16025 | Not Available | Positive | 3382779 - 3385190 | 88586.7 |
| dj-1/pfpi family protein | DAH51_16030 | Not Available | Negative | 3385323 - 3386066 | 26191.6 |
| membrane-like protein | DAH51_16035 | Not Available | Negative | 3386119 - 3386658 | 18755.3 |
| dna-3-methyladenine glycosylase i | DAH51_16040 | Not Available | Negative | 3386634 - 3387191 | 20791.9 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DAH51_16045 | Not Available | Negative | 3387312 - 3389819 | 92150.2 |
| hypothetical protein | DAH51_16050 | Not Available | Positive | 3389905 - 3390384 | 16506.9 |
| duf1993 domain-containing protein | DAH51_16055 | Not Available | Negative | 3390385 - 3390891 | 18267.0 |
| hypothetical protein | DAH51_16060 | Not Available | Negative | 3390908 - 3392101 | 42619.2 |
| hypothetical protein | DAH51_16065 | Not Available | Negative | 3392257 - 3392862 | 21417.0 |
| plp-dependent aminotransferase family protein | DAH51_16070 | Not Available | Positive | 3392951 - 3394414 | 52489.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
