Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l31 | DAH51_14620 | Not Available | Positive | 3098076 - 3098300 | 8269.71 |
| 3-dehydroquinate synthase | DAH51_14625 | Not Available | Negative | 3098673 - 3099782 | 39078.0 |
| shikimate kinase | DAH51_14630 | Not Available | Negative | 3099773 - 3100321 | 20130.5 |
| hypothetical protein | DAH51_14635 | Not Available | Positive | 3100416 - 3100601 | 6705.37 |
| hypothetical protein | DAH51_14640 | Not Available | Positive | 3100607 - 3102436 | 63752.9 |
| tyrosine recombinase | DAH51_14645 | Not Available | Positive | 3102451 - 3103380 | 33367.3 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | DAH51_14650 | Not Available | Positive | 3103392 - 3104336 | 33533.3 |
| peptidase m48 ste24p | DAH51_14655 | Not Available | Positive | 3104418 - 3105896 | 51941.8 |
| flp family type ivb pilin | DAH51_14660 | Not Available | Negative | 3105973 - 3106134 | 5514.9 |
| flp family type ivb pilin | DAH51_14665 | Not Available | Negative | 3106268 - 3106453 | 6622.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
