Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor ts | DAH51_14570 | Not Available | Positive | 3087793 - 3088719 | 31619.7 |
| ump kinase | DAH51_14575 | Not Available | Positive | 3088946 - 3089671 | 25755.1 |
| ribosome recycling factor | DAH51_14580 | Not Available | Positive | 3089674 - 3090231 | 20227.3 |
| isoprenyl transferase | DAH51_14585 | Not Available | Positive | 3090275 - 3091015 | 27107.6 |
| phosphatidate cytidylyltransferase | DAH51_14590 | Not Available | Positive | 3091021 - 3091797 | 26791.9 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DAH51_14595 | Not Available | Positive | 3091797 - 3092954 | 39779.0 |
| rip metalloprotease rsep | DAH51_14600 | Not Available | Positive | 3092951 - 3094084 | 40616.0 |
| outer membrane protein assembly factor bama | DAH51_14605 | Not Available | Positive | 3094173 - 3096809 | 97707.4 |
| omph family outer membrane protein | DAH51_14610 | Not Available | Positive | 3096809 - 3097477 | 22816.2 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | DAH51_14615 | Not Available | Positive | 3097482 - 3097961 | 17071.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
