Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | DAH51_14065 | Not Available | Negative | 2986253 - 2987845 | 55612.2 |
| s9 family peptidase | DAH51_14070 | Not Available | Positive | 2988005 - 2989951 | 69407.8 |
| duf2029 domain-containing protein | DAH51_14075 | Not Available | Negative | 2989924 - 2991111 | 42350.0 |
| heparinase | DAH51_14080 | Not Available | Negative | 2991344 - 2993110 | 63406.3 |
| ribulose-phosphate 3-epimerase | DAH51_14085 | Not Available | Negative | 2993107 - 2993769 | 23592.7 |
| diguanylate cyclase | DAH51_14090 | Not Available | Negative | 2993842 - 2994327 | 17937.5 |
| methyltransferase domain-containing protein | DAH51_14095 | Not Available | Negative | 2994379 - 2995689 | 46014.3 |
| hypothetical protein | DAH51_14100 | Not Available | Negative | 2995727 - 2996044 | 11366.1 |
| zinc metalloprotease htpx | DAH51_14105 | Not Available | Negative | 2996044 - 2996991 | 33016.1 |
| duf1674 domain-containing protein | DAH51_14110 | Not Available | Positive | 2997100 - 2997273 | 6414.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
