Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DAH51_00395 | Not Available | Positive | 92843 - 95761 | 103261.0 |
| amidohydrolase | DAH51_00400 | Not Available | Positive | 95835 - 97481 | 60419.1 |
| histidine utilization repressor | DAH51_00405 | Not Available | Negative | 97608 - 98318 | 25661.9 |
| formimidoylglutamate deiminase | DAH51_00410 | Not Available | Negative | 98315 - 99670 | 48497.7 |
| imidazolonepropionase | DAH51_00415 | Not Available | Positive | 99761 - 100966 | 42166.7 |
| histidine ammonia-lyase | DAH51_00420 | Not Available | Positive | 100963 - 102492 | 52385.2 |
| n-formylglutamate deformylase | DAH51_00425 | Not Available | Positive | 102489 - 103301 | 29583.7 |
| urocanate hydratase | DAH51_00430 | Not Available | Positive | 103308 - 104975 | 60429.3 |
| endoglucanase | DAH51_00435 | Not Available | Negative | 104995 - 106005 | 36556.7 |
| hypothetical protein | DAH51_00440 | Not Available | Negative | 105995 - 106459 | 16987.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
