Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DAH51_13310 | Not Available | Negative | 2827060 - 2827746 | 24384.2 |
| lipoprotein-releasing abc transporter permease subunit | DAH51_13315 | Not Available | Negative | 2827739 - 2828989 | 44981.0 |
| heat-shock protein | DAH51_13320 | Not Available | Positive | 2829613 - 2830074 | 17456.8 |
| hypothetical protein | DAH51_13325 | Not Available | Negative | 2830139 - 2830324 | 6350.37 |
| ribose 5-phosphate isomerase b | DAH51_13330 | Not Available | Positive | 2830427 - 2830864 | 15015.9 |
| serine hydroxymethyltransferase | DAH51_13335 | Not Available | Positive | 2830876 - 2832207 | 46727.6 |
| transcriptional repressor nrdr | DAH51_13340 | Not Available | Positive | 2832214 - 2832675 | 17539.8 |
| rrna methyltransferase | DAH51_13345 | Not Available | Positive | 2832757 - 2833842 | 39699.6 |
| chorismate mutase | DAH51_13350 | Not Available | Negative | 2833839 - 2834135 | 11073.1 |
| 30s ribosomal protein s4 | DAH51_13355 | Not Available | Positive | 2834392 - 2835006 | 23227.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
