Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | DAH51_12695 | Not Available | Negative | 2692342 - 2692743 | 13548.5 |
| rlua family pseudouridine synthase | DAH51_12700 | Not Available | Positive | 2692761 - 2693711 | 34105.4 |
| rna polymerase sigma factor rpoh | DAH51_12705 | Not Available | Positive | 2693790 - 2694704 | 34827.8 |
| gnat family n-acetyltransferase | DAH51_12710 | Not Available | Negative | 2694762 - 2695247 | 17107.2 |
| tetr/acrr family transcriptional regulator | DAH51_12715 | Not Available | Negative | 2695244 - 2695792 | 19216.7 |
| mfs transporter | DAH51_12720 | Not Available | Positive | 2695881 - 2697170 | 45675.0 |
| monofunctional biosynthetic peptidoglycan transglycosylase | DAH51_12725 | Not Available | Positive | 2697215 - 2697928 | 25920.6 |
| tonb-dependent receptor | DAH51_12730 | Not Available | Negative | 2698141 - 2700699 | 91470.3 |
| atp-dependent clp protease atp-binding subunit clpx | DAH51_12735 | Not Available | Negative | 2701066 - 2702334 | 45856.4 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | DAH51_12740 | Not Available | Negative | 2702468 - 2703103 | 23312.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
