Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3617 domain-containing protein | DAH51_12090 | Not Available | Negative | 2566746 - 2567252 | 17428.7 |
| hnh endonuclease | DAH51_12095 | Not Available | Negative | 2567333 - 2567638 | 11274.8 |
| hypothetical protein | DAH51_12100 | Not Available | Negative | 2567616 - 2568551 | 33320.2 |
| duf3617 domain-containing protein | DAH51_12105 | Not Available | Negative | 2568548 - 2569114 | 20086.9 |
| lysm peptidoglycan-binding domain-containing protein | DAH51_12110 | Not Available | Positive | 2569323 - 2570339 | 37953.3 |
| hypothetical protein | DAH51_12115 | Not Available | Positive | 2570329 - 2570754 | 16296.1 |
| excinuclease abc subunit uvrb | DAH51_12120 | Not Available | Positive | 2570805 - 2572988 | 81620.0 |
| type ii toxin-antitoxin system rele/pare family toxin | DAH51_12125 | Not Available | Positive | 2573097 - 2573378 | 11231.3 |
| addiction module antidote protein, higa family | DAH51_12130 | Not Available | Positive | 2573353 - 2573673 | 11792.9 |
| hypothetical protein | DAH51_12135 | Not Available | Negative | 2573681 - 2573995 | 10816.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
