Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | DAH51_11180 | Not Available | Negative | 2365360 - 2366514 | 41368.5 |
| hypothetical protein | DAH51_11185 | Not Available | Positive | 2366692 - 2367150 | 16813.1 |
| 2-oxo acid dehydrogenase subunit e2 | DAH51_11190 | Not Available | Negative | 2367199 - 2368494 | 45974.1 |
| alpha-ketoacid dehydrogenase subunit beta | DAH51_11195 | Not Available | Negative | 2368500 - 2369504 | 36535.9 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | DAH51_11200 | Not Available | Negative | 2369558 - 2370853 | 47489.9 |
| thymidylate synthase | DAH51_11205 | Not Available | Negative | 2370971 - 2371906 | 35511.2 |
| dna repair protein radc | DAH51_11210 | Not Available | Positive | 2372111 - 2372386 | 10338.6 |
| Trna-pro | Not Available | Not Available | Positive | 2372491 - 2372567 | Not Available |
| response regulator | DAH51_11220 | Not Available | Negative | 2372739 - 2374556 | 65935.8 |
| protein-glutamate o-methyltransferase cher | DAH51_11225 | Not Available | Negative | 2374546 - 2375421 | 33204.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
