Sphingobium yanoikuyae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium yanoikuyae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium yanoikuyae strain SK-NIH.Env6_1116 NODE_126, whole

Gene Summary

Adenine Count

1044020 bp

Thymine Count

1039951 bp

Guanine Count

1862718 bp

Cytosine Count

1875819 bp

Genome Length

5822508 bp

Protein-coding Genes

5290 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit nuoiDAH51_11030Not AvailableNegative2339943 - 234042818640.2
nadh-quinone oxidoreductase subunit nuohDAH51_11035Not AvailableNegative2340425 - 234147438522.1
nadh-quinone oxidoreductase subunit gDAH51_11040Not AvailableNegative2341471 - 234347771406.8
nadh-quinone oxidoreductase subunit nuofDAH51_11045Not AvailableNegative2343480 - 234481448564.2
nad(p)h-dependent oxidoreductase subunit eDAH51_11050Not AvailableNegative2344811 - 234549424849.4
nadh-quinone oxidoreductase subunit dDAH51_11055Not AvailableNegative2345494 - 234672946945.7
nadh-quinone oxidoreductase subunit cDAH51_11060Not AvailableNegative2346729 - 234751728712.7
nadh-quinone oxidoreductase subunit bDAH51_11065Not AvailableNegative2347519 - 234803719253.4
nadh-quinone oxidoreductase subunit aDAH51_11070Not AvailableNegative2348064 - 234843814054.4
inositol monophosphataseDAH51_11075Not AvailableNegative2348734 - 234954629683.3

Displaying genes 2251 – 2260 of 5462 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0005202(S)-4-hydroxy-2-oxopentanoateC5H7O4Chemical structure of (S)-4-hydroxy-2-oxopentanoateNot available
Average131.108Da
Monoisotopic131.034982285Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.