Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | DAH51_00095 | Not Available | Negative | 18508 - 19617 | 39595.0 |
| trna dihydrouridine synthase dusb | DAH51_00100 | Not Available | Negative | 19614 - 20636 | 36934.8 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DAH51_00105 | Not Available | Positive | 20753 - 21934 | 42010.0 |
| cina family protein | DAH51_00110 | Not Available | Positive | 21942 - 22460 | 17656.2 |
| type ii toxin-antitoxin system rata family toxin | DAH51_00115 | Not Available | Negative | 22406 - 22882 | 17898.1 |
| lipoyl synthase | DAH51_00120 | Not Available | Negative | 22890 - 23870 | 36054.7 |
| carbonic anhydrase | DAH51_00125 | Not Available | Positive | 23909 - 24547 | 23356.7 |
| nyn domain-containing protein | DAH51_00130 | Not Available | Positive | 24561 - 25376 | 28954.6 |
| acylphosphatase | DAH51_00135 | Not Available | Positive | 25376 - 25657 | 10129.2 |
| hypothetical protein | DAH51_00140 | Not Available | Negative | 25753 - 26076 | 12139.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
