Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein cpab | DAH51_09250 | Not Available | Negative | 1999115 - 2000128 | 34453.5 |
| peptidase | DAH51_09255 | Not Available | Negative | 2000180 - 2000653 | 16972.8 |
| alpha/beta hydrolase | DAH51_09260 | Not Available | Positive | 2000703 - 2001656 | 35789.9 |
| fad-binding oxidoreductase | DAH51_09265 | Not Available | Positive | 2001653 - 2002756 | 39078.6 |
| duf1508 domain-containing protein | DAH51_09270 | Not Available | Positive | 2002778 - 2002954 | 6404.6 |
| ribonuclease hi | DAH51_09275 | Not Available | Negative | 2002993 - 2003439 | 16480.7 |
| homoserine kinase | DAH51_09280 | Not Available | Negative | 2003436 - 2004413 | 35336.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DAH51_09285 | Not Available | Negative | 2004419 - 2005378 | 34350.2 |
| hypothetical protein | DAH51_09290 | Not Available | Positive | 2005546 - 2006154 | 21269.2 |
| arginine--trna ligase | DAH51_09295 | Not Available | Positive | 2006284 - 2008011 | 62353.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
