Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | DAH51_07540 | Not Available | Positive | 1637492 - 1638325 | 29325.4 |
| flagellar biosynthesis protein flha | DAH51_07545 | Not Available | Positive | 1638335 - 1640452 | 74490.3 |
| flia/whig family rna polymerase sigma factor | DAH51_07550 | Not Available | Positive | 1640465 - 1641202 | 27232.7 |
| glucans biosynthesis glucosyltransferase mdoh | DAH51_07555 | Not Available | Negative | 1641219 - 1643105 | 68880.7 |
| hypothetical protein | DAH51_07560 | Not Available | Negative | 1643166 - 1644653 | 54060.9 |
| flagellin flic | DAH51_07565 | Not Available | Negative | 1644867 - 1645727 | 29380.2 |
| sigma-54-dependent fis family transcriptional regulator | DAH51_07570 | Not Available | Positive | 1646040 - 1647317 | 45396.9 |
| flagellar hook-basal body complex protein flie | DAH51_07575 | Not Available | Positive | 1647331 - 1647690 | 12075.3 |
| flagellar m-ring protein flif | DAH51_07580 | Not Available | Positive | 1647694 - 1649442 | 61890.3 |
| flagellar motor switch protein flig | DAH51_07585 | Not Available | Positive | 1649435 - 1650451 | 37206.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
