Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1272 domain-containing protein | DAH51_06460 | Not Available | Positive | 1447444 - 1447668 | 8079.6 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DAH51_06465 | Not Available | Positive | 1447665 - 1448426 | 25742.3 |
| ribonuclease hii | DAH51_06470 | Not Available | Positive | 1448419 - 1449018 | 21445.9 |
| l,d-transpeptidase | DAH51_06475 | Not Available | Positive | 1449098 - 1449736 | 22598.6 |
| amino acid permease | DAH51_06480 | Not Available | Negative | 1449741 - 1451162 | 49756.9 |
| hypothetical protein | DAH51_06485 | Not Available | Positive | 1451327 - 1451899 | 19526.4 |
| llm class f420-dependent oxidoreductase | DAH51_06490 | Not Available | Negative | 1451896 - 1452810 | 32529.8 |
| sdr family nad(p)-dependent oxidoreductase | DAH51_06495 | Not Available | Negative | 1452807 - 1453673 | 29893.7 |
| 3-hydroxybutyrate dehydrogenase | DAH51_06500 | Not Available | Negative | 1453768 - 1454559 | 27757.3 |
| patatin-like phospholipase family protein | DAH51_06505 | Not Available | Negative | 1454556 - 1455734 | 43138.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
