Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase family protein | DAH51_05540 | Not Available | Positive | 1245115 - 1246320 | 44632.3 |
| alpha/beta hydrolase | DAH51_05545 | Not Available | Positive | 1246422 - 1247513 | 40101.3 |
| carboxynorspermidine decarboxylase | DAH51_05550 | Not Available | Positive | 1247520 - 1248692 | 42656.0 |
| type iii plp-dependent enzyme | DAH51_05555 | Not Available | Positive | 1248953 - 1250146 | 43264.4 |
| class i sam-dependent rna methyltransferase | DAH51_05560 | Not Available | Negative | 1250310 - 1251515 | 42622.4 |
| nad(p)h-hydrate dehydratase | DAH51_05565 | Not Available | Negative | 1251512 - 1252906 | 47073.9 |
| hypothetical protein | DAH51_05570 | Not Available | Negative | 1252903 - 1253259 | 12120.7 |
| n-formylglutamate amidohydrolase | DAH51_05575 | Not Available | Negative | 1253312 - 1254028 | 25983.2 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DAH51_05580 | Not Available | Negative | 1254025 - 1254879 | 30130.0 |
| hypothetical protein | DAH51_05585 | Not Available | Negative | 1254903 - 1256519 | 56812.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
