Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease subunit hslv | DAH51_05340 | Not Available | Positive | 1196759 - 1197325 | 20192.2 |
| atp-dependent protease atpase subunit hslu | DAH51_05345 | Not Available | Positive | 1197343 - 1198644 | 47882.5 |
| s9 family peptidase | DAH51_05350 | Not Available | Positive | 1198757 - 1200880 | 78808.9 |
| proline--trna ligase | DAH51_05355 | Not Available | Negative | 1201004 - 1202530 | 56729.8 |
| hypothetical protein | DAH51_05360 | Not Available | Negative | 1202620 - 1202964 | 12554.0 |
| polyhydroxyalkanoate synthesis repressor phar | DAH51_05365 | Not Available | Negative | 1202971 - 1203549 | 21072.3 |
| alpha/beta fold hydrolase | DAH51_05370 | Not Available | Positive | 1203674 - 1204648 | 34882.9 |
| acetyl-coa c-acetyltransferase | DAH51_05375 | Not Available | Positive | 1204699 - 1205871 | 39860.9 |
| alanine racemase | DAH51_05380 | Not Available | Negative | 1206036 - 1207079 | 37039.2 |
| mfs transporter | DAH51_05385 | Not Available | Negative | 1207107 - 1208696 | 56620.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
