Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DAH51_04080 | Not Available | Positive | 864898 - 865473 | 21077.2 |
| copper resistance system multicopper oxidase | DAH51_04085 | Not Available | Positive | 865480 - 867219 | 62785.8 |
| copper resistance protein b | DAH51_04090 | Not Available | Positive | 867216 - 868076 | 30956.4 |
| tonb-dependent receptor | DAH51_04095 | Not Available | Positive | 868588 - 870576 | 72508.4 |
| peptidase | DAH51_04100 | Not Available | Positive | 870579 - 872078 | 55648.1 |
| hoxn/hupn/nixa family nickel/cobalt transporter | DAH51_04105 | Not Available | Positive | 872075 - 873127 | 37140.1 |
| sdr family nad(p)-dependent oxidoreductase | DAH51_04110 | Not Available | Negative | 873219 - 873965 | 26170.3 |
| rnd transporter | DAH51_04115 | Not Available | Negative | 874005 - 875411 | 49462.7 |
| efflux rnd transporter periplasmic adaptor subunit | DAH51_04120 | Not Available | Negative | 875401 - 876606 | 41245.8 |
| acrb/acrd/acrf family protein | DAH51_04125 | Not Available | Negative | 876599 - 879793 | 112592.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
