Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | SHJ |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
36682 bp
Thymine Count
36288 bp
Guanine Count
58268 bp
Cytosine Count
57945 bp
Genome Length
189183 bp
Protein-coding Genes
189 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is21-like element isssp5 family helper atpase istb | BV87_RS26285 | Not Available | Negative | 9554 - 10321 | 28900.3 |
| is21 family transposase | BV87_RS26290 | Not Available | Negative | 10318 - 11769 | 55286.2 |
| hypothetical protein | BV87_RS26295 | Not Available | Negative | 11932 - 12639 | 24102.6 |
| hypothetical protein | BV87_RS27545 | Not Available | Negative | 12796 - 13065 | 9710.36 |
| lysr family transcriptional regulator | BV87_RS26300 | Not Available | Positive | 13056 - 13508 | 16048.2 |
| hypothetical protein | BV87_RS26305 | Not Available | Positive | 13938 - 14195 | 8751.42 |
| transporter | BV87_RS26310 | Not Available | Positive | 14300 - 14995 | 25317.3 |
| pqq-dependent dehydrogenase, methanol/ethanol family | BV87_RS26315 | Not Available | Positive | 15020 - 17188 | 77398.7 |
| aldehyde dehydrogenase family protein | BV87_RS26320 | Not Available | Positive | 17361 - 18764 | 49924.7 |
| amp-binding protein | BV87_RS26325 | Not Available | Positive | 18761 - 20392 | 59534.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
