Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | SHJ |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
36682 bp
Thymine Count
36288 bp
Guanine Count
58268 bp
Cytosine Count
57945 bp
Genome Length
189183 bp
Protein-coding Genes
189 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toll/interleukin-1 receptor domain-containing protein | BV87_RS26630 | Not Available | Positive | 78327 - 79487 | 42779.1 |
| hypothetical protein | BV87_RS26635 | Not Available | Positive | 79490 - 80146 | 24533.2 |
| toll/interleukin-1 receptor domain-containing protein | BV87_RS26640 | Not Available | Negative | 80163 - 80717 | 20811.7 |
| tir domain-containing protein | BV87_RS26645 | Not Available | Negative | 80767 - 81264 | 18149.6 |
| alpha/beta hydrolase family protein | BV87_RS26655 | Not Available | Negative | 81785 - 83686 | 69319.5 |
| hypothetical protein | BV87_RS26660 | Not Available | Negative | 84253 - 84714 | 17195.7 |
| hypothetical protein | BV87_RS26665 | Not Available | Negative | 84701 - 86848 | 79540.8 |
| hypothetical protein | BV87_RS26670 | Not Available | Negative | 86845 - 88647 | 66447.8 |
| tyrosine-type recombinase/integrase | BV87_RS26675 | Not Available | Negative | 88680 - 89972 | 48866.7 |
| hypothetical protein | BV87_RS26680 | Not Available | Negative | 90086 - 90388 | 11445.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
