Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | SHJ |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
36682 bp
Thymine Count
36288 bp
Guanine Count
58268 bp
Cytosine Count
57945 bp
Genome Length
189183 bp
Protein-coding Genes
189 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BV87_RS27550 | Not Available | Positive | 68899 - 69108 | 7202.33 |
| gntr family transcriptional regulator | BV87_RS26585 | Not Available | Negative | 69124 - 69507 | 14328.2 |
| is21-like element isssp5 family helper atpase istb | BV87_RS26590 | Not Available | Negative | 69603 - 70370 | 28898.4 |
| is21 family transposase | BV87_RS26595 | Not Available | Negative | 70367 - 71818 | 55242.1 |
| hypothetical protein | BV87_RS28110 | Not Available | Negative | 71920 - 72318 | 14714.7 |
| hypothetical protein | BV87_RS26605 | Not Available | Negative | 72422 - 72886 | 16735.8 |
| integrase | BV87_RS26610 | Not Available | Negative | 72870 - 74672 | 67876.2 |
| site-specific integrase | BV87_RS26615 | Not Available | Negative | 74677 - 76494 | 67929.5 |
| tyrosine-type recombinase/integrase | BV87_RS26620 | Not Available | Negative | 76487 - 77629 | 42929.9 |
| tir domain-containing protein | BV87_RS26625 | Not Available | Positive | 77833 - 78321 | 18702.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
