Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | SHJ |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
36682 bp
Thymine Count
36288 bp
Guanine Count
58268 bp
Cytosine Count
57945 bp
Genome Length
189183 bp
Protein-coding Genes
189 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | BV87_RS26535 | Not Available | Positive | 58116 - 58760 | 22773.5 |
| integrase | BV87_RS26540 | Not Available | Positive | 58760 - 60421 | 62535.8 |
| exea family protein | BV87_RS26545 | Not Available | Positive | 60421 - 61392 | 35916.4 |
| hypothetical protein | BV87_RS26550 | Not Available | Negative | 61570 - 62064 | 16577.6 |
| hypothetical protein | BV87_RS26555 | Not Available | Negative | 62139 - 62480 | 12106.8 |
| cation diffusion facilitator family transporter | BV87_RS26560 | Not Available | Negative | 62847 - 63908 | 37619.0 |
| tonb-dependent siderophore receptor | BV87_RS26565 | Not Available | Negative | 64041 - 66239 | 80445.6 |
| nuclear transport factor 2 family protein | BV87_RS26570 | Not Available | Negative | 66273 - 66914 | 22825.3 |
| carboxymuconolactone decarboxylase family protein | BV87_RS26575 | Not Available | Positive | 67265 - 67606 | 12274.0 |
| bifunctional alpha/beta hydrolase/osmc family protein | BV87_RS26580 | Not Available | Positive | 67677 - 68906 | 43525.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
